HCSGD entry for SCAMP3
1. General information
| Official gene symbol | SCAMP3 |
|---|---|
| Entrez ID | 10067 |
| Gene full name | secretory carrier membrane protein 3 |
| Other gene symbols | C1orf3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0006892 | Post-Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0032526 | Response to retinoic acid | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0254056609 | 0.9477801869 | 0.3742634787 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.1313086756 |
| GSE13712_SHEAR | Down | -0.0943235284 |
| GSE13712_STATIC | Up | 0.0251177501 |
| GSE19018 | Up | 0.1427571458 |
| GSE19899_A1 | Up | 0.0903262293 |
| GSE19899_A2 | Up | 0.4965879197 |
| PubMed_21979375_A1 | Up | 1.5459420288 |
| PubMed_21979375_A2 | Up | 1.0489720659 |
| GSE35957 | Down | -0.0127017054 |
| GSE36640 | Up | 1.1007387249 |
| GSE54402 | Up | 0.3594945124 |
| GSE9593 | Up | 0.3606758100 |
| GSE43922 | Up | 0.1545764537 |
| GSE24585 | Down | -0.2474859274 |
| GSE37065 | Down | -0.0474014133 |
| GSE28863_A1 | Down | -0.1112628911 |
| GSE28863_A2 | Up | 0.2255196188 |
| GSE28863_A3 | Down | -0.2900541747 |
| GSE28863_A4 | Down | -0.1644580543 |
| GSE48662 | Up | 0.0826701898 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT004952 | qRT-PCR | Functional MTI (Weak) | 17942906 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT032041 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045441 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
