HCSGD entry for HS3ST3B1
1. General information
| Official gene symbol | HS3ST3B1 |
|---|---|
| Entrez ID | 9953 |
| Gene full name | heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 |
| Other gene symbols | 30ST3B1 3OST3B1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006024 | Glycosaminoglycan biosynthetic process | TAS | biological_process |
| GO:0008467 | [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity | TAS | molecular_function |
| GO:0015012 | Heparan sulfate proteoglycan biosynthetic process | TAS | biological_process |
| GO:0015015 | Heparan sulfate proteoglycan biosynthetic process, enzymatic modification | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0033872 | [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4002450705 | 0.2409802667 | 0.9999902473 | 0.9452116490 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1864657465 |
| GSE13712_SHEAR | Down | -0.0383537575 |
| GSE13712_STATIC | Down | -0.0366140482 |
| GSE19018 | Down | -0.7254119114 |
| GSE19899_A1 | Down | -0.1941416937 |
| GSE19899_A2 | Up | 0.1205521605 |
| PubMed_21979375_A1 | Up | 0.2384832393 |
| PubMed_21979375_A2 | Up | 0.2281018117 |
| GSE35957 | Up | 0.8012692994 |
| GSE36640 | Down | -0.7884790296 |
| GSE54402 | Up | 0.7551559716 |
| GSE9593 | Down | -0.3719374216 |
| GSE43922 | Up | 0.0376560490 |
| GSE24585 | Down | -0.1447354092 |
| GSE37065 | Up | 0.1687423603 |
| GSE28863_A1 | Up | 0.0683656617 |
| GSE28863_A2 | Down | -0.2995594407 |
| GSE28863_A3 | Down | -0.0671504840 |
| GSE28863_A4 | Up | 0.0285911974 |
| GSE48662 | Down | -0.0337660517 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026649 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030947 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
