HCSGD entry for ZBTB40
1. General information
| Official gene symbol | ZBTB40 |
|---|---|
| Entrez ID | 9923 |
| Gene full name | zinc finger and BTB domain containing 40 |
| Other gene symbols | ZNF923 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0030282 | Bone mineralization | NAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0272785305 | 0.9707432430 | 0.3833412707 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1093297200 |
| GSE13712_SHEAR | Up | 0.2129852526 |
| GSE13712_STATIC | Down | -0.0561806423 |
| GSE19018 | Down | -0.0414843125 |
| GSE19899_A1 | Up | 0.1462767183 |
| GSE19899_A2 | Up | 0.3991642201 |
| PubMed_21979375_A1 | Up | 0.6433150470 |
| PubMed_21979375_A2 | Up | 0.9637166994 |
| GSE35957 | Down | -0.2511037427 |
| GSE36640 | Up | 0.3947750192 |
| GSE54402 | Up | 0.3184332438 |
| GSE9593 | Down | -0.0420883543 |
| GSE43922 | Up | 0.7279603317 |
| GSE24585 | Up | 0.1211132827 |
| GSE37065 | Up | 0.2256690215 |
| GSE28863_A1 | Up | 0.6499987992 |
| GSE28863_A2 | Up | 0.7024189415 |
| GSE28863_A3 | Down | -0.2830042819 |
| GSE28863_A4 | Down | -0.3049043415 |
| GSE48662 | Up | 0.1513983909 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036494 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
