HCSGD entry for DENND4B
1. General information
| Official gene symbol | DENND4B |
|---|---|
| Entrez ID | 9909 |
| Gene full name | DENN/MADD domain containing 4B |
| Other gene symbols | KIAA0476 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0017112 | Rab guanyl-nucleotide exchange factor activity | IDA | molecular_function |
| GO:0032313 | Regulation of Rab GTPase activity | IDA | biological_process |
| GO:0032318 | Regulation of Ras GTPase activity | IDA | biological_process |
| GO:0032483 | Regulation of Rab protein signal transduction | IDA | biological_process |
| GO:0043087 | Regulation of GTPase activity | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9235643023 | 0.0654819840 | 0.9999902473 | 0.4832904428 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0120190647 |
| GSE13712_SHEAR | Down | -0.2466168964 |
| GSE13712_STATIC | Down | -0.1307314160 |
| GSE19018 | Down | -0.6436714818 |
| GSE19899_A1 | Down | -0.3214932923 |
| GSE19899_A2 | Down | -0.3689188197 |
| PubMed_21979375_A1 | Down | -0.0837744899 |
| PubMed_21979375_A2 | Up | 0.3866126023 |
| GSE35957 | Down | -0.7560970263 |
| GSE36640 | Down | -0.6951569487 |
| GSE54402 | Up | 0.1765960568 |
| GSE9593 | Down | -0.5752434424 |
| GSE43922 | Up | 0.0467425781 |
| GSE24585 | Down | -0.0070703235 |
| GSE37065 | Up | 0.0823992586 |
| GSE28863_A1 | Up | 0.1865988600 |
| GSE28863_A2 | Up | 0.4997005209 |
| GSE28863_A3 | Down | -0.0269137623 |
| GSE28863_A4 | Down | -0.1480985567 |
| GSE48662 | Down | -0.5480144714 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-501-3p | MIMAT0004774 | MIRT037992 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-500a-3p | MIMAT0002871 | MIRT041150 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041379 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-151a-3p | MIMAT0000757 | MIRT043613 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044839 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049787 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-28-5p | MIMAT0000085 | MIRT050007 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051981 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
