HCSGD entry for RBM19
1. General information
| Official gene symbol | RBM19 |
|---|---|
| Entrez ID | 9904 |
| Gene full name | RNA binding motif protein 19 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | ISS | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA ISS | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0040019 | Positive regulation of embryonic development | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0354159720 | 0.9707536530 | 0.4289847216 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0952240665 |
| GSE13712_SHEAR | Up | 0.1104858898 |
| GSE13712_STATIC | Up | 0.4308773899 |
| GSE19018 | Down | -0.3005106168 |
| GSE19899_A1 | Up | 0.2768819309 |
| GSE19899_A2 | Up | 0.5339201780 |
| PubMed_21979375_A1 | Up | 0.8606893757 |
| PubMed_21979375_A2 | Up | 1.4028600643 |
| GSE35957 | Down | -0.2008170938 |
| GSE36640 | Down | -0.0434640729 |
| GSE54402 | Up | 0.3221931658 |
| GSE9593 | Down | -0.0338289475 |
| GSE43922 | Up | 0.5095412088 |
| GSE24585 | Down | -0.1318865176 |
| GSE37065 | Down | -0.0726788252 |
| GSE28863_A1 | Up | 0.3032033269 |
| GSE28863_A2 | Up | 0.2690681098 |
| GSE28863_A3 | Up | 0.0505812034 |
| GSE28863_A4 | Up | 0.1430984080 |
| GSE48662 | Up | 0.0524274897 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001601 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027657 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029422 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
