HCSGD entry for URB1
1. General information
| Official gene symbol | URB1 |
|---|---|
| Entrez ID | 9875 |
| Gene full name | URB1 ribosome biogenesis 1 homolog (S. cerevisiae) |
| Other gene symbols | C21orf108 NPA1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005730 | Nucleolus | IDA NAS | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0922836290 | 0.6480125185 | 0.6382158351 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1037052360 |
| GSE13712_SHEAR | Up | 0.0568917430 |
| GSE13712_STATIC | Up | 0.2524945636 |
| GSE19018 | Down | -0.5407693213 |
| GSE19899_A1 | Down | -0.0242328526 |
| GSE19899_A2 | Up | 0.2767440158 |
| PubMed_21979375_A1 | Up | 0.2380669108 |
| PubMed_21979375_A2 | Up | 0.3939553842 |
| GSE35957 | Up | 0.4566648173 |
| GSE36640 | Up | 0.0085389356 |
| GSE54402 | Down | -0.0476223683 |
| GSE9593 | Down | -0.1736973631 |
| GSE43922 | Up | 0.3776471136 |
| GSE24585 | Down | -0.5330221312 |
| GSE37065 | Down | -0.4480409932 |
| GSE28863_A1 | Up | 0.8254759370 |
| GSE28863_A2 | Up | 0.7531292675 |
| GSE28863_A3 | Up | 0.1503245163 |
| GSE28863_A4 | Down | -0.0978556929 |
| GSE48662 | Up | 0.2117622037 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018081 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-760 | MIMAT0004957 | MIRT036788 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037624 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038597 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
