HCSGD entry for URB2
1. General information
| Official gene symbol | URB2 |
|---|---|
| Entrez ID | 9816 |
| Gene full name | URB2 ribosome biogenesis 2 homolog (S. cerevisiae) |
| Other gene symbols | KIAA0133 NET10 NPA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5501705330 | 0.0397167129 | 0.9999902473 | 0.3754969828 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1251581000 |
| GSE13712_SHEAR | Up | 0.6612104242 |
| GSE13712_STATIC | Up | 0.4877402074 |
| GSE19018 | Down | -1.1786539428 |
| GSE19899_A1 | Down | -0.2586866720 |
| GSE19899_A2 | Up | 0.0253331073 |
| PubMed_21979375_A1 | Up | 1.1645857375 |
| PubMed_21979375_A2 | Down | -0.1619202030 |
| GSE35957 | Down | -0.0465631700 |
| GSE36640 | Down | -0.9723052130 |
| GSE54402 | Up | 0.0048188028 |
| GSE9593 | Down | -0.0789325556 |
| GSE43922 | Up | 0.1409743620 |
| GSE24585 | Down | -0.5192082019 |
| GSE37065 | Down | -0.2426785991 |
| GSE28863_A1 | Down | -0.1172292477 |
| GSE28863_A2 | Up | 0.5501742724 |
| GSE28863_A3 | Down | -0.5940616389 |
| GSE28863_A4 | Down | -0.0980191839 |
| GSE48662 | Down | -0.3905504335 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027740 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029987 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042651 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046400 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049621 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
