HCSGD entry for TOMM20
1. General information
| Official gene symbol | TOMM20 |
|---|---|
| Entrez ID | 9804 |
| Gene full name | translocase of outer mitochondrial membrane 20 homolog (yeast) |
| Other gene symbols | MAS20 MOM19 TOM20 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005742 | Mitochondrial outer membrane translocase complex | NAS TAS | cellular_component |
| GO:0006626 | Protein targeting to mitochondrion | IDA TAS | biological_process |
| GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | IDA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0051082 | Unfolded protein binding | IDA | molecular_function |
| GO:0055085 | Transmembrane transport | IDA | biological_process |
| GO:0071806 | Protein transmembrane transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3009054823 | 0.9174795145 | 0.9995436648 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1135285825 |
| GSE13712_SHEAR | Down | -0.1641426518 |
| GSE13712_STATIC | Down | -0.0354808001 |
| GSE19018 | Up | 0.0561783796 |
| GSE19899_A1 | Up | 0.2676395533 |
| GSE19899_A2 | Up | 0.2320289691 |
| PubMed_21979375_A1 | Up | 0.2971541038 |
| PubMed_21979375_A2 | Up | 0.4911553222 |
| GSE35957 | Up | 0.0537039406 |
| GSE36640 | Up | 0.0496958044 |
| GSE54402 | Up | 0.1665126611 |
| GSE9593 | Up | 0.0792317622 |
| GSE43922 | Up | 0.2199502593 |
| GSE24585 | Down | -0.3561334236 |
| GSE37065 | Up | 0.0117045264 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.3329122306 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020995 | Reporter assay;Other | Non-Functional MTI | 20584899 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024153 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032124 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038775 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-503-5p | MIMAT0002874 | MIRT041097 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043268 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050518 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
