HCSGD entry for SERTAD2
1. General information
| Official gene symbol | SERTAD2 |
|---|---|
| Entrez ID | 9792 |
| Gene full name | SERTA domain containing 2 |
| Other gene symbols | Sei-2 TRIP-Br2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003713 | Transcription coactivator activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0030308 | Negative regulation of cell growth | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1593684434 | 0.5391331484 | 0.7914597736 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3450006902 |
| GSE13712_SHEAR | Up | 0.2135471183 |
| GSE13712_STATIC | Up | 0.0947559456 |
| GSE19018 | Up | 0.2853651382 |
| GSE19899_A1 | Up | 0.4922248475 |
| GSE19899_A2 | Up | 0.0971605666 |
| PubMed_21979375_A1 | Up | 0.0604006669 |
| PubMed_21979375_A2 | Up | 0.1656547896 |
| GSE35957 | Up | 0.1706011028 |
| GSE36640 | Up | 0.3969081018 |
| GSE54402 | Down | -0.0918421741 |
| GSE9593 | Down | -0.2225012102 |
| GSE43922 | Up | 0.1628061089 |
| GSE24585 | Up | 0.2694000910 |
| GSE37065 | Down | -0.0741039728 |
| GSE28863_A1 | Down | -0.0645704299 |
| GSE28863_A2 | Up | 0.3341913243 |
| GSE28863_A3 | Down | -0.0607617579 |
| GSE28863_A4 | Down | -0.4580423324 |
| GSE48662 | Down | -0.0388437938 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-210-3p | MIMAT0000267 | MIRT003157 | immunoprecipitaion//Microarray//qRT-PCR | Functional MTI (Weak) | 19826008 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT005095 | Microarray | Functional MTI (Weak) | 19193853 |
| hsa-miR-151a-5p | MIMAT0004697 | MIRT019527 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019555 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-375 | MIMAT0000728 | MIRT019769 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022235 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT025013 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025710 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027470 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027995 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028231 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038482 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
