HCSGD entry for PHACTR2
1. General information
| Official gene symbol | PHACTR2 |
|---|---|
| Entrez ID | 9749 |
| Gene full name | phosphatase and actin regulator 2 |
| Other gene symbols | C6orf56 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0004864 | Protein phosphatase inhibitor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8730145587 | 0.0156194711 | 0.9999902473 | 0.2446963712 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1796667073 |
| GSE13712_SHEAR | Down | -0.0185073092 |
| GSE13712_STATIC | Down | -0.5801151549 |
| GSE19018 | Up | 0.1306646454 |
| GSE19899_A1 | Down | -0.8572052883 |
| GSE19899_A2 | Down | -0.2161330137 |
| PubMed_21979375_A1 | Down | -0.3135585021 |
| PubMed_21979375_A2 | Down | -0.2247894186 |
| GSE35957 | Up | 2.1573599277 |
| GSE36640 | Up | 0.3319051006 |
| GSE54402 | Down | -0.4165682290 |
| GSE9593 | Down | -0.1131714889 |
| GSE43922 | Down | -0.3343604709 |
| GSE24585 | Down | -0.4226060326 |
| GSE37065 | Up | 0.1413169911 |
| GSE28863_A1 | Down | -0.3218491090 |
| GSE28863_A2 | Down | -0.0848938930 |
| GSE28863_A3 | Down | -0.6957324236 |
| GSE28863_A4 | Down | -0.1089654867 |
| GSE48662 | Down | -0.2065228989 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023052 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030971 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043915 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-185-5p | MIMAT0000455 | MIRT045328 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
