HCSGD entry for TRAM2
1. General information
| Official gene symbol | TRAM2 |
|---|---|
| Entrez ID | 9697 |
| Gene full name | translocation associated membrane protein 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0032964 | Collagen biosynthetic process | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0620119942 | 0.0319503248 | 0.5391219183 | 0.3360469437 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4209818071 |
| GSE13712_SHEAR | Up | 0.3562446695 |
| GSE13712_STATIC | Up | 0.7577828654 |
| GSE19018 | Up | 0.3939006335 |
| GSE19899_A1 | Down | -0.6553356517 |
| GSE19899_A2 | Down | -0.7800799629 |
| PubMed_21979375_A1 | Down | -1.1135595247 |
| PubMed_21979375_A2 | Down | -0.4719378262 |
| GSE35957 | Up | 0.6680875246 |
| GSE36640 | Down | -0.0987934545 |
| GSE54402 | Down | -0.7273746100 |
| GSE9593 | Up | 1.0866209358 |
| GSE43922 | Down | -0.3589112450 |
| GSE24585 | Up | 0.1142170047 |
| GSE37065 | Down | -0.3170651294 |
| GSE28863_A1 | Up | 1.2042138774 |
| GSE28863_A2 | Up | 1.2433857144 |
| GSE28863_A3 | Up | 0.1725287661 |
| GSE28863_A4 | Down | -0.4007737417 |
| GSE48662 | Down | -0.4576976257 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023369 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025874 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027751 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029785 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
