HCSGD entry for NUP93
1. General information
| Official gene symbol | NUP93 |
|---|---|
| Entrez ID | 9688 |
| Gene full name | nucleoporin 93kDa |
| Other gene symbols | NIC96 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0005635 | Nuclear envelope | TAS | cellular_component |
| GO:0005643 | Nuclear pore | IDA IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0007077 | Mitotic nuclear envelope disassembly | TAS | biological_process |
| GO:0008645 | Hexose transport | TAS | biological_process |
| GO:0010827 | Regulation of glucose transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015758 | Glucose transport | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0017056 | Structural constituent of nuclear pore | IMP | molecular_function |
| GO:0019221 | Cytokine-mediated signaling pathway | TAS | biological_process |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
| GO:0034399 | Nuclear periphery | IDA | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0051028 | MRNA transport | IEA | biological_process |
| GO:0051292 | Nuclear pore complex assembly | IMP | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9091072718 | 0.1513992136 | 0.9999902473 | 0.7515991513 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0848440099 |
| GSE13712_SHEAR | Down | -0.0013396467 |
| GSE13712_STATIC | Up | 0.0197817616 |
| GSE19018 | Down | -0.0626153457 |
| GSE19899_A1 | Down | -0.1060974619 |
| GSE19899_A2 | Down | -0.2371542978 |
| PubMed_21979375_A1 | Down | -0.0411445554 |
| PubMed_21979375_A2 | Down | -0.1348238188 |
| GSE35957 | Down | -0.4289955341 |
| GSE36640 | Down | -0.5658267217 |
| GSE54402 | Up | 0.1906254806 |
| GSE9593 | Down | -0.3997814595 |
| GSE43922 | Down | -0.0318568201 |
| GSE24585 | Down | -0.1826505036 |
| GSE37065 | Down | -0.1763081194 |
| GSE28863_A1 | Up | 0.1623813812 |
| GSE28863_A2 | Up | 0.3473223451 |
| GSE28863_A3 | Down | -0.1330585605 |
| GSE28863_A4 | Up | 0.1597403781 |
| GSE48662 | Down | -0.5029937304 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-218-5p | MIMAT0000275 | MIRT001059 | qRT-PCR//Western blot | Non-Functional MTI | 17998940 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046016 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
