HCSGD entry for DEPDC5
1. General information
| Official gene symbol | DEPDC5 |
|---|---|
| Entrez ID | 9681 |
| Gene full name | DEP domain containing 5 |
| Other gene symbols | DEP.5 FFEVF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005096 | GTPase activator activity | IEA | molecular_function |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005829 | Cytosol | IEA ISS | cellular_component |
| GO:0035556 | Intracellular signal transduction | IEA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8829850196 | 0.2446870750 | 0.9999902473 | 0.9524413635 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0248868951 |
| GSE13712_SHEAR | Up | 0.0571400545 |
| GSE13712_STATIC | Up | 0.1534380774 |
| GSE19018 | Down | -0.3615064110 |
| GSE19899_A1 | Down | -0.1346582850 |
| GSE19899_A2 | Down | -0.2177644155 |
| PubMed_21979375_A1 | Up | 0.4603118513 |
| PubMed_21979375_A2 | Up | 0.1211012210 |
| GSE35957 | Down | -0.0731068676 |
| GSE36640 | Down | -0.2941952015 |
| GSE54402 | Down | -0.2547248659 |
| GSE9593 | Down | -0.0686934829 |
| GSE43922 | Down | -0.0411394415 |
| GSE24585 | Down | -0.0143673134 |
| GSE37065 | Up | 0.0898722202 |
| GSE28863_A1 | Down | -0.0742989793 |
| GSE28863_A2 | Up | 0.1325158004 |
| GSE28863_A3 | Down | -0.2874426561 |
| GSE28863_A4 | Down | -0.0232731369 |
| GSE48662 | Down | -0.1006175738 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017533 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043372 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
