HCSGD entry for SNCAIP
1. General information
| Official gene symbol | SNCAIP |
|---|---|
| Entrez ID | 9627 |
| Gene full name | synuclein, alpha interacting protein |
| Other gene symbols | SYPH1 Sph1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0031625 | Ubiquitin protein ligase binding | IPI | molecular_function |
| GO:0042417 | Dopamine metabolic process | IDA | biological_process |
| GO:0042734 | Presynaptic membrane | NAS | cellular_component |
| GO:0043025 | Neuronal cell body | NAS | cellular_component |
| GO:0046928 | Regulation of neurotransmitter secretion | IDA | biological_process |
| GO:0090083 | Regulation of inclusion body assembly | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9255640743 | 0.0264912655 | 0.9999902473 | 0.3118410555 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0107813160 |
| GSE13712_SHEAR | Down | -0.5370485505 |
| GSE13712_STATIC | Down | -2.0000864459 |
| GSE19018 | Down | -0.0722555726 |
| GSE19899_A1 | Up | 0.0909140387 |
| GSE19899_A2 | Down | -0.7240538191 |
| PubMed_21979375_A1 | Up | 0.1749881217 |
| PubMed_21979375_A2 | Down | -0.3258782265 |
| GSE35957 | Down | -0.0480300872 |
| GSE36640 | Down | -1.2365320219 |
| GSE54402 | Down | -0.6186599607 |
| GSE9593 | Down | -0.8322422380 |
| GSE43922 | Up | 0.0535321117 |
| GSE24585 | Up | 0.4875994375 |
| GSE37065 | Down | -0.0853217242 |
| GSE28863_A1 | Up | 0.1161632304 |
| GSE28863_A2 | Down | -0.0098413357 |
| GSE28863_A3 | Up | 0.0584300634 |
| GSE28863_A4 | Up | 0.0072147013 |
| GSE48662 | Down | -0.1536889595 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
