HCSGD entry for SEC22B
1. General information
| Official gene symbol | SEC22B |
|---|---|
| Entrez ID | 9554 |
| Gene full name | SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) |
| Other gene symbols | ERS-24 SEC22L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0006888 | ER to Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0033116 | Endoplasmic reticulum-Golgi intermediate compartment membrane | IEA | cellular_component |
| GO:0042470 | Melanosome | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4816168763 | 0.2294078644 | 0.9999902473 | 0.9218693740 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2161087126 |
| GSE13712_SHEAR | Down | -0.2377723249 |
| GSE13712_STATIC | Up | 0.0024632600 |
| GSE19018 | Down | -0.0265520296 |
| GSE19899_A1 | Down | -0.3514415987 |
| GSE19899_A2 | Down | -0.1868348474 |
| PubMed_21979375_A1 | Down | -0.0182527327 |
| PubMed_21979375_A2 | Down | -0.3687901963 |
| GSE35957 | Down | -0.3063231953 |
| GSE36640 | Up | 0.3569637254 |
| GSE54402 | Down | -0.0888166730 |
| GSE9593 | Up | 0.3084823152 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.3812513711 |
| GSE28863_A2 | Up | 0.9440504022 |
| GSE28863_A3 | Down | -0.8362791004 |
| GSE28863_A4 | Down | -0.3295024680 |
| GSE48662 | Up | 0.1744265942 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
