HCSGD entry for FXR2
1. General information
| Official gene symbol | FXR2 |
|---|---|
| Entrez ID | 9513 |
| Gene full name | fragile X mental retardation, autosomal homolog 2 |
| Other gene symbols | FMR1L2 FXR2P |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0022625 | Cytosolic large ribosomal subunit | TAS | cellular_component |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0228496524 | 0.9753253752 | 0.3606136091 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3091257176 |
| GSE13712_SHEAR | Up | 0.0164414213 |
| GSE13712_STATIC | Up | 0.0123113095 |
| GSE19018 | Up | 0.1264429081 |
| GSE19899_A1 | Up | 0.2282901194 |
| GSE19899_A2 | Up | 1.1409254899 |
| PubMed_21979375_A1 | Up | 1.2785149703 |
| PubMed_21979375_A2 | Up | 0.1938460200 |
| GSE35957 | Down | -0.3749989018 |
| GSE36640 | Up | 0.4836623423 |
| GSE54402 | Up | 0.6078198896 |
| GSE9593 | Down | -0.0281728740 |
| GSE43922 | Up | 0.3523851662 |
| GSE24585 | Up | 0.0573959989 |
| GSE37065 | Down | -0.0335829623 |
| GSE28863_A1 | Up | 0.1123821157 |
| GSE28863_A2 | Down | -0.1875190901 |
| GSE28863_A3 | Down | -0.0973260066 |
| GSE28863_A4 | Up | 0.0505473798 |
| GSE48662 | Up | 0.6368944975 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005207 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042893 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048260 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT051023 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052187 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
