HCSGD entry for SLC4A8
1. General information
| Official gene symbol | SLC4A8 |
|---|---|
| Entrez ID | 9498 |
| Gene full name | solute carrier family 4, sodium bicarbonate cotransporter, member 8 |
| Other gene symbols | NBC3 NDCBE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005452 | Inorganic anion exchanger activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006814 | Sodium ion transport | IEA | biological_process |
| GO:0015701 | Bicarbonate transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1323097489 | 0.8397916151 | 0.7376883076 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0293009764 |
| GSE13712_SHEAR | Up | 0.3066609839 |
| GSE13712_STATIC | Up | 0.3544064725 |
| GSE19018 | Up | 0.0654783340 |
| GSE19899_A1 | Up | 0.1738280208 |
| GSE19899_A2 | Down | -0.0059137619 |
| PubMed_21979375_A1 | Up | 0.1618333596 |
| PubMed_21979375_A2 | Up | 0.0821198913 |
| GSE35957 | Down | -0.0970184395 |
| GSE36640 | Down | -0.0044981019 |
| GSE54402 | Up | 0.8953381478 |
| GSE9593 | Down | -0.0099080813 |
| GSE43922 | Up | 0.0845249556 |
| GSE24585 | Up | 0.4049304656 |
| GSE37065 | Down | -0.0420308248 |
| GSE28863_A1 | Down | -0.0479568588 |
| GSE28863_A2 | Down | -0.2154642245 |
| GSE28863_A3 | Down | -0.4849135081 |
| GSE28863_A4 | Up | 0.3175303675 |
| GSE48662 | Down | -0.2450577314 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017276 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
