HCSGD entry for CPNE6
1. General information
| Official gene symbol | CPNE6 |
|---|---|
| Entrez ID | 9362 |
| Gene full name | copine VI (neuronal) |
| Other gene symbols | N-COPINE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001786 | Phosphatidylserine binding | IEA | molecular_function |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005509 | Calcium ion binding | TAS | molecular_function |
| GO:0006629 | Lipid metabolic process | TAS | biological_process |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | TAS | biological_process |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5390390221 | 0.9025335246 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0628360824 |
| GSE13712_SHEAR | Up | 0.0450694407 |
| GSE13712_STATIC | Up | 0.0242659084 |
| GSE19018 | Up | 0.0968796279 |
| GSE19899_A1 | Down | -0.0222159243 |
| GSE19899_A2 | Up | 0.2632519702 |
| PubMed_21979375_A1 | Down | -0.0476376485 |
| PubMed_21979375_A2 | Down | -0.1835695218 |
| GSE35957 | Up | 0.0435905681 |
| GSE36640 | Up | 0.0458040316 |
| GSE54402 | Up | 0.0033655381 |
| GSE9593 | Up | 0.0856208785 |
| GSE43922 | Up | 0.0320726654 |
| GSE24585 | Up | 0.2277270565 |
| GSE37065 | Down | -0.0061227467 |
| GSE28863_A1 | Down | -0.0844040728 |
| GSE28863_A2 | Down | -0.0245952289 |
| GSE28863_A3 | Up | 0.4543675396 |
| GSE28863_A4 | Up | 0.0083381989 |
| GSE48662 | Up | 0.1307041879 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT003821 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017193 | Microarray | Functional MTI (Weak) | 18185580 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
