HCSGD entry for NDST3
1. General information
| Official gene symbol | NDST3 |
|---|---|
| Entrez ID | 9348 |
| Gene full name | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 |
| Other gene symbols | HSST3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0015012 | Heparan sulfate proteoglycan biosynthetic process | IEA | biological_process |
| GO:0015016 | [heparan sulfate]-glucosamine N-sulfotransferase activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016787 | Hydrolase activity | IEA | molecular_function |
| GO:0019213 | Deacetylase activity | IEA | molecular_function |
| GO:0030210 | Heparin biosynthetic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9457366893 | 0.4166234983 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0253938086 |
| GSE13712_SHEAR | Down | -0.0926192420 |
| GSE13712_STATIC | Up | 0.0016410695 |
| GSE19018 | Up | 0.0727788211 |
| GSE19899_A1 | Up | 0.0155818504 |
| GSE19899_A2 | Down | -0.3158514224 |
| PubMed_21979375_A1 | Up | 0.2142699743 |
| PubMed_21979375_A2 | Up | 0.0067190572 |
| GSE35957 | Down | -0.0198515778 |
| GSE36640 | Down | -0.2035825174 |
| GSE54402 | Down | -0.2855991471 |
| GSE9593 | Up | 0.0549461076 |
| GSE43922 | Down | -0.0606586258 |
| GSE24585 | Down | -0.1751120701 |
| GSE37065 | Down | -0.0849187628 |
| GSE28863_A1 | Down | -0.0685204430 |
| GSE28863_A2 | Up | 0.0379616026 |
| GSE28863_A3 | Up | 0.0700350735 |
| GSE28863_A4 | Down | -0.0360389039 |
| GSE48662 | Up | 0.0413135798 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017221 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
