HCSGD entry for SNAP29
1. General information
| Official gene symbol | SNAP29 |
|---|---|
| Entrez ID | 9342 |
| Gene full name | synaptosomal-associated protein, 29kDa |
| Other gene symbols | CEDNIK SNAP-29 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000046 | Autophagic vacuole fusion | IMP | biological_process |
| GO:0005484 | SNAP receptor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006887 | Exocytosis | TAS | biological_process |
| GO:0006903 | Vesicle targeting | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0031201 | SNARE complex | IDA | cellular_component |
| GO:0043005 | Neuron projection | IEA | cellular_component |
| GO:0045202 | Synapse | IEA | cellular_component |
| GO:0061025 | Membrane fusion | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0941709851 | 0.9320946431 | 0.6428787085 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1362991668 |
| GSE13712_SHEAR | Down | -0.2477545979 |
| GSE13712_STATIC | Down | -0.1286197795 |
| GSE19018 | Up | 0.1354132449 |
| GSE19899_A1 | Up | 0.0609510070 |
| GSE19899_A2 | Up | 0.5187668649 |
| PubMed_21979375_A1 | Up | 0.0939300181 |
| PubMed_21979375_A2 | Up | 0.0774752777 |
| GSE35957 | Down | -0.4687744921 |
| GSE36640 | Up | 0.7649962917 |
| GSE54402 | Up | 0.2435445759 |
| GSE9593 | Up | 0.4218354029 |
| GSE43922 | Down | -0.1270448921 |
| GSE24585 | Up | 0.3956888636 |
| GSE37065 | Down | -0.0252139660 |
| GSE28863_A1 | Up | 0.4591328287 |
| GSE28863_A2 | Up | 0.5024781719 |
| GSE28863_A3 | Down | -0.0550295672 |
| GSE28863_A4 | Down | -0.0201430371 |
| GSE48662 | Down | -0.0722295009 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT001499 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025633 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT041037 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
