HCSGD entry for B4GALT5
1. General information
| Official gene symbol | B4GALT5 |
|---|---|
| Entrez ID | 9334 |
| Gene full name | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 |
| Other gene symbols | B4Gal-T5 BETA4-GALT-IV beta4Gal-T5 beta4GalT-V gt-V |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0008378 | Galactosyltransferase activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1289492269 | 0.1116238213 | 0.7294374812 | 0.6398193815 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2140315470 |
| GSE13712_SHEAR | Down | -0.5439444070 |
| GSE13712_STATIC | Down | -0.6425977323 |
| GSE19018 | Down | -1.1804410423 |
| GSE19899_A1 | Down | -0.3654081311 |
| GSE19899_A2 | Up | 0.5194278100 |
| PubMed_21979375_A1 | Down | -0.0409815184 |
| PubMed_21979375_A2 | Up | 0.2074736764 |
| GSE35957 | Up | 0.6623304067 |
| GSE36640 | Down | -0.6670214030 |
| GSE54402 | Up | 0.2079887780 |
| GSE9593 | Up | 0.0464293109 |
| GSE43922 | Up | 0.0955229289 |
| GSE24585 | Up | 0.0293738928 |
| GSE37065 | Up | 0.0399636061 |
| GSE28863_A1 | Up | 1.5850415214 |
| GSE28863_A2 | Up | 0.4286524655 |
| GSE28863_A3 | Down | -0.2276923479 |
| GSE28863_A4 | Up | 0.0420639730 |
| GSE48662 | Up | 0.0371499875 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018798 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023032 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-503-5p | MIMAT0002874 | MIRT041131 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-29b-3p | MIMAT0000100 | MIRT048365 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
