HCSGD entry for B4GALT6
1. General information
| Official gene symbol | B4GALT6 |
|---|---|
| Entrez ID | 9331 |
| Gene full name | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 |
| Other gene symbols | B4Gal-T6 beta4Gal-T6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | IEA TAS | biological_process |
| GO:0008378 | Galactosyltransferase activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0507886706 | 0.4631738726 | 0.4937217793 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2264744730 |
| GSE13712_SHEAR | Up | 0.1780082280 |
| GSE13712_STATIC | Up | 0.2958564300 |
| GSE19018 | Down | -0.9800770654 |
| GSE19899_A1 | Up | 0.2556577805 |
| GSE19899_A2 | Up | 0.4852560272 |
| PubMed_21979375_A1 | Up | 1.1752741345 |
| PubMed_21979375_A2 | Up | 1.3138816040 |
| GSE35957 | Up | 0.1215346196 |
| GSE36640 | Down | -0.3756478798 |
| GSE54402 | Up | 0.1966087888 |
| GSE9593 | Up | 0.2380713817 |
| GSE43922 | Up | 1.1935990469 |
| GSE24585 | Down | -0.2565264412 |
| GSE37065 | Down | -0.1180621140 |
| GSE28863_A1 | Down | -0.3613495217 |
| GSE28863_A2 | Down | -0.0851392965 |
| GSE28863_A3 | Down | -0.1379930944 |
| GSE28863_A4 | Up | 0.0273162113 |
| GSE48662 | Up | 0.0221753040 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018554 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024717 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026806 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
