HCSGD entry for ZNHIT3
1. General information
| Official gene symbol | ZNHIT3 |
|---|---|
| Entrez ID | 9326 |
| Gene full name | zinc finger, HIT-type containing 3 |
| Other gene symbols | TRIP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005622 | Intracellular | NAS | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0046966 | Thyroid hormone receptor binding | TAS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8432691425 | 0.1210020440 | 0.9999902473 | 0.6686122376 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1330116914 |
| GSE13712_SHEAR | Down | -0.5207574665 |
| GSE13712_STATIC | Down | -0.1401468505 |
| GSE19018 | Down | -0.2283629625 |
| GSE19899_A1 | Down | -0.2491871209 |
| GSE19899_A2 | Down | -0.2217010563 |
| PubMed_21979375_A1 | Up | 0.5808535195 |
| PubMed_21979375_A2 | Down | -0.1824848146 |
| GSE35957 | Down | -0.2257854432 |
| GSE36640 | Down | -0.5679142387 |
| GSE54402 | Up | 0.2351429941 |
| GSE9593 | Down | -0.1513883397 |
| GSE43922 | Up | 0.0504562320 |
| GSE24585 | Up | 0.1120871875 |
| GSE37065 | Up | 0.1201203835 |
| GSE28863_A1 | Up | 0.0784853662 |
| GSE28863_A2 | Up | 0.0117231682 |
| GSE28863_A3 | Down | -0.6429240176 |
| GSE28863_A4 | Up | 0.0048623152 |
| GSE48662 | Down | -0.1178453710 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024305 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026564 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043888 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
