HCSGD entry for PRDM6
1. General information
| Official gene symbol | PRDM6 |
|---|---|
| Entrez ID | 93166 |
| Gene full name | PR domain containing 6 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0018024 | Histone-lysine N-methyltransferase activity | IEA | molecular_function |
| GO:0022008 | Neurogenesis | IEA | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051151 | Negative regulation of smooth muscle cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9486180008 | 0.1118823373 | 0.9999902473 | 0.6407430374 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0402871140 |
| GSE13712_SHEAR | Down | -0.0626512251 |
| GSE13712_STATIC | Up | 0.0513619299 |
| GSE19018 | Down | -0.8396706922 |
| GSE19899_A1 | Down | -0.0709397082 |
| GSE19899_A2 | Down | -0.4999208844 |
| PubMed_21979375_A1 | Down | -0.1162953897 |
| PubMed_21979375_A2 | Down | -0.2411076849 |
| GSE35957 | Down | -0.1270019570 |
| GSE36640 | Down | -0.1221777394 |
| GSE54402 | Down | -0.1482060470 |
| GSE9593 | Down | -0.0047578078 |
| GSE43922 | Up | 0.0391664209 |
| GSE24585 | Down | -0.4852280798 |
| GSE37065 | Down | -0.1177021517 |
| GSE28863_A1 | Up | 0.1493403672 |
| GSE28863_A2 | Down | -0.0909222495 |
| GSE28863_A3 | Up | 0.0755114889 |
| GSE28863_A4 | Up | 0.0810823147 |
| GSE48662 | Up | 0.3472244735 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
