HCSGD entry for IMP4
1. General information
| Official gene symbol | IMP4 |
|---|---|
| Entrez ID | 92856 |
| Gene full name | IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) |
| Other gene symbols | BXDC4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006364 | RRNA processing | NAS | biological_process |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0332895559 | 0.3949363132 | 0.4190870875 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.0164931584 |
| GSE13712_SHEAR | Up | 0.2672281118 |
| GSE13712_STATIC | Up | 0.3646705997 |
| GSE19018 | Down | -0.4230535069 |
| GSE19899_A1 | Up | 0.3746490821 |
| GSE19899_A2 | Up | 0.4880228924 |
| PubMed_21979375_A1 | Up | 1.7632718695 |
| PubMed_21979375_A2 | Up | 0.4784790178 |
| GSE35957 | Down | -0.7993315567 |
| GSE36640 | Down | -0.1282808920 |
| GSE54402 | Up | 0.6810276217 |
| GSE9593 | Down | -0.3830412632 |
| GSE43922 | Up | 0.4512928364 |
| GSE24585 | Down | -0.6285424825 |
| GSE37065 | Down | -0.2076968164 |
| GSE28863_A1 | Down | -0.2070803194 |
| GSE28863_A2 | Up | 0.1687141182 |
| GSE28863_A3 | Down | -0.0000322790 |
| GSE28863_A4 | Up | 0.0115446662 |
| GSE48662 | Down | -0.2371857684 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027762 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-320a | MIMAT0000510 | MIRT044455 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
