HCSGD entry for SHKBP1
1. General information
| Official gene symbol | SHKBP1 |
|---|---|
| Entrez ID | 92799 |
| Gene full name | SH3KBP1 binding protein 1 |
| Other gene symbols | Sb1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7201710155 | 0.1209412066 | 0.9999902473 | 0.6686122376 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0302593462 |
| GSE13712_SHEAR | Down | -0.0892691056 |
| GSE13712_STATIC | Down | -0.1455281191 |
| GSE19018 | Up | 0.3703721717 |
| GSE19899_A1 | Down | -0.4792031569 |
| GSE19899_A2 | Down | -0.1217232605 |
| PubMed_21979375_A1 | Up | 0.4640397126 |
| PubMed_21979375_A2 | Up | 0.6063193077 |
| GSE35957 | Down | -0.0878402970 |
| GSE36640 | Down | -0.2545937774 |
| GSE54402 | Up | 0.0603249115 |
| GSE9593 | Down | -0.3024937975 |
| GSE43922 | Down | -0.5233178101 |
| GSE24585 | Up | 0.2076929668 |
| GSE37065 | Down | -0.1438164928 |
| GSE28863_A1 | Down | -0.1736567970 |
| GSE28863_A2 | Down | -0.1869517769 |
| GSE28863_A3 | Down | -0.3340353172 |
| GSE28863_A4 | Down | -0.0706720803 |
| GSE48662 | Up | 0.2320012220 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT040411 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
