HCSGD entry for SPECC1
1. General information
| Official gene symbol | SPECC1 |
|---|---|
| Entrez ID | 92521 |
| Gene full name | sperm antigen with calponin homology and coiled-coil domains 1 |
| Other gene symbols | CYTSB HCMOGT-1 HCMOGT1 NSP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2321244786 | 0.3278826108 | 0.9156997153 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1944977807 |
| GSE13712_SHEAR | Down | -0.0114546697 |
| GSE13712_STATIC | Up | 0.0853040976 |
| GSE19018 | Down | -0.4544815589 |
| GSE19899_A1 | Up | 0.0493099974 |
| GSE19899_A2 | Down | -0.4750366756 |
| PubMed_21979375_A1 | Down | -0.4617944507 |
| PubMed_21979375_A2 | Up | 0.5014240060 |
| GSE35957 | Up | 0.2513716547 |
| GSE36640 | Up | 0.6039642374 |
| GSE54402 | Down | -0.2586319954 |
| GSE9593 | Up | 0.3999234619 |
| GSE43922 | Up | 0.0288099278 |
| GSE24585 | Up | 0.2858975841 |
| GSE37065 | Down | -0.1071611373 |
| GSE28863_A1 | Up | 0.1402928678 |
| GSE28863_A2 | Down | -0.0807434528 |
| GSE28863_A3 | Up | 0.7145066357 |
| GSE28863_A4 | Down | -0.1469000936 |
| GSE48662 | Down | -0.2753222592 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020795 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045245 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047508 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
