HCSGD entry for SPSB4

1. General information

Official gene symbolSPSB4
Entrez ID92369
Gene full namesplA/ryanodine receptor domain and SOCS box containing 4
Other gene symbolsSSB-4 SSB4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0016567Protein ubiquitinationIEAbiological_process
GO:0035556Intracellular signal transductionIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.50859683520.83833242280.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0325320206
GSE13712_SHEARDown-0.0944373483
GSE13712_STATICDown-0.0969584170
GSE19018Up0.0460716805
GSE19899_A1Up0.0649206900
GSE19899_A2Up0.1970162910
PubMed_21979375_A1Down-0.1053063524
PubMed_21979375_A2Down-0.1603024913
GSE35957Up0.0298195709
GSE36640Down-0.0022416292
GSE54402Up0.2186397369
GSE9593Down-0.0142390957
GSE43922Up0.2170371929
GSE24585Down-0.0554714745
GSE37065Down-0.0968840784
GSE28863_A1Down-0.0824155608
GSE28863_A2Up0.1250806245
GSE28863_A3Up0.0648056686
GSE28863_A4Down-0.0315462818
GSE48662Up0.6450195848

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.