HCSGD entry for NAF1
1. General information
| Official gene symbol | NAF1 |
|---|---|
| Entrez ID | 92345 |
| Gene full name | nuclear assembly factor 1 ribonucleoprotein |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001522 | Pseudouridine synthesis | IEA | biological_process |
| GO:0003723 | RNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005732 | Small nucleolar ribonucleoprotein complex | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0006364 | RRNA processing | IEA | biological_process |
| GO:0030054 | Cell junction | IDA | cellular_component |
| GO:0042254 | Ribosome biogenesis | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0751051974 | 0.2398782797 | 0.5807414512 | 0.9430673936 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2171007023 |
| GSE13712_SHEAR | Up | 0.5326322440 |
| GSE13712_STATIC | Up | 0.2783326335 |
| GSE19018 | Down | -0.2362617142 |
| GSE19899_A1 | Up | 0.9728265705 |
| GSE19899_A2 | Up | 0.9058511903 |
| PubMed_21979375_A1 | Up | 0.4692321295 |
| PubMed_21979375_A2 | Up | 0.2722884859 |
| GSE35957 | Down | -0.1673635822 |
| GSE36640 | Down | -0.5382810667 |
| GSE54402 | Up | 0.3927174036 |
| GSE9593 | Down | -0.3061184056 |
| GSE43922 | Up | 0.0537712231 |
| GSE24585 | Down | -0.7556006336 |
| GSE37065 | Up | 0.0965674910 |
| GSE28863_A1 | Up | 0.1913747148 |
| GSE28863_A2 | Down | -0.0179296530 |
| GSE28863_A3 | Down | -0.2862760282 |
| GSE28863_A4 | Down | -0.3529862647 |
| GSE48662 | Up | 0.3030836376 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032447 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040431 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
