HCSGD entry for TMEM88

1. General information

Official gene symbolTMEM88
Entrez ID92162
Gene full nametransmembrane protein 88
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005886Plasma membraneIEAcellular_component
GO:0007275Multicellular organismal developmentIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0016055Wnt signaling pathwayIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.23990548230.46831371530.92591344181.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.3938811929
GSE13712_SHEARDown-1.3243103251
GSE13712_STATICDown-0.9977590698
GSE19018Up0.0721913505
GSE19899_A1Up0.0119132184
GSE19899_A2Up0.5739141732
PubMed_21979375_A1Up1.1968700651
PubMed_21979375_A2Up0.3207612002
GSE35957Up0.2598647306
GSE36640Up0.0392247886
GSE54402Up0.0137296281
GSE9593Down-0.2704738054
GSE43922Up0.0480373212
GSE24585Up0.5095393334
GSE37065Up0.0636447580
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.3014095632

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-708-5pMIMAT0004926MIRT006941Luciferase reporter assay//qRT-PCRFunctional MTI22573352
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.