HCSGD entry for RFT1
1. General information
| Official gene symbol | RFT1 |
|---|---|
| Entrez ID | 91869 |
| Gene full name | RFT1 homolog (S. cerevisiae) |
| Other gene symbols | CDG1N |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005319 | Lipid transporter activity | IEA | molecular_function |
| GO:0006488 | Dolichol-linked oligosaccharide biosynthetic process | TAS | biological_process |
| GO:0008643 | Carbohydrate transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9148051214 | 0.1555706622 | 0.9999902473 | 0.7621022520 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0791207258 |
| GSE13712_SHEAR | Down | -0.1242898597 |
| GSE13712_STATIC | Up | 0.0187786513 |
| GSE19018 | Down | -0.3808123531 |
| GSE19899_A1 | Down | -0.1037087463 |
| GSE19899_A2 | Up | 0.0889043567 |
| PubMed_21979375_A1 | Down | -0.0369976088 |
| PubMed_21979375_A2 | Down | -0.3229279430 |
| GSE35957 | Down | -0.2412798933 |
| GSE36640 | Down | -0.1677330138 |
| GSE54402 | Down | -0.0964630690 |
| GSE9593 | Down | -0.3867370004 |
| GSE43922 | Up | 0.2101125862 |
| GSE24585 | Down | -0.3574073424 |
| GSE37065 | Down | -0.0797060133 |
| GSE28863_A1 | Up | 0.3095323653 |
| GSE28863_A2 | Up | 0.1929286443 |
| GSE28863_A3 | Up | 0.2836974866 |
| GSE28863_A4 | Down | -0.2165078208 |
| GSE48662 | Down | -0.0979177746 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001338 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT001422 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-133a-3p | MIMAT0000427 | MIRT021700 | Microarray | Functional MTI (Weak) | 21396852 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022119 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028445 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-330-5p | MIMAT0004693 | MIRT038251 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
