HCSGD entry for CHRDL1
1. General information
| Official gene symbol | CHRDL1 |
|---|---|
| Entrez ID | 91851 |
| Gene full name | chordin-like 1 |
| Other gene symbols | CHL NRLN1 VOPT dA141H5.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001503 | Ossification | IEA | biological_process |
| GO:0001654 | Eye development | IMP | biological_process |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0030509 | BMP signaling pathway | TAS | biological_process |
| GO:0048749 | Compound eye development | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0621035067 | 0.0314866115 | 0.5391219183 | 0.3330202410 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0405694520 |
| GSE13712_SHEAR | Down | -0.0651228897 |
| GSE13712_STATIC | Up | 0.0906660647 |
| GSE19018 | Up | 0.1783572260 |
| GSE19899_A1 | Up | 0.1521579287 |
| GSE19899_A2 | Down | -0.7980186915 |
| PubMed_21979375_A1 | Down | -1.0715872058 |
| PubMed_21979375_A2 | Down | -0.4465932492 |
| GSE35957 | Up | 0.6168044746 |
| GSE36640 | Down | -2.2482993830 |
| GSE54402 | Down | -0.8310802982 |
| GSE9593 | Up | 1.0439588475 |
| GSE43922 | Down | -0.1433152724 |
| GSE24585 | Up | 0.7819838981 |
| GSE37065 | Down | -1.0487503384 |
| GSE28863_A1 | Up | 1.1151922224 |
| GSE28863_A2 | Up | 0.0165433686 |
| GSE28863_A3 | Up | 0.2577854063 |
| GSE28863_A4 | Down | -0.0356104792 |
| GSE48662 | Up | 0.3670216400 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022205 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 9637068 | For analysis of the senescence pattern within individual coleoptiles, we monitored the distribution of chlorophyll (Chl) in entire coleoptiles and in cross-sections of coleoptiles by recording the autofluorescence of Chl |
| 9637068 | Degradation of Chl was apparent at the tip of the margins of opened-out coleoptiles on day 4, when the overall levels of soluble protein and Chl per coleoptile had reached maximum values |
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