HCSGD entry for SMDT1

1. General information

Official gene symbolSMDT1
Entrez ID91689
Gene full namesingle-pass membrane protein with aspartate-rich tail 1
Other gene symbolsC22orf32 DDDD dJ186O1.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0006851Mitochondrial calcium ion transportIMPbiological_process
GO:0031305Integral component of mitochondrial inner membraneIDAcellular_component
GO:0051560Mitochondrial calcium ion homeostasisIMPbiological_process
GO:1990246Uniplex complexIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.92167831010.37765944680.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1171185444
GSE13712_SHEARDown-0.1776199301
GSE13712_STATICDown-0.1639831347
GSE19018Up0.0206154172
GSE19899_A1Down-0.4015321375
GSE19899_A2Up0.2728909667
PubMed_21979375_A1Down-0.0880530909
PubMed_21979375_A2Up0.2293542874
GSE35957Down-0.4062628689
GSE36640Up0.0121244844
GSE54402Up0.0063982670
GSE9593Up0.0400439478
GSE43922Down-0.1547539991
GSE24585Up0.1013158713
GSE37065Down-0.1998539335
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0045441414

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-615-3pMIMAT0003283MIRT040009CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.