HCSGD entry for SYT12
1. General information
| Official gene symbol | SYT12 |
|---|---|
| Entrez ID | 91683 |
| Gene full name | synaptotagmin XII |
| Other gene symbols | SYT11 sytXII |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030672 | Synaptic vesicle membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6613131112 | 0.5359763877 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0606740889 |
| GSE13712_SHEAR | Down | -0.0569962647 |
| GSE13712_STATIC | Down | -0.1624764456 |
| GSE19018 | Up | 0.0052386518 |
| GSE19899_A1 | Down | -0.0831229342 |
| GSE19899_A2 | Up | 0.1133772979 |
| PubMed_21979375_A1 | Up | 0.1521995923 |
| PubMed_21979375_A2 | Down | -0.0708360327 |
| GSE35957 | Down | -0.4258333288 |
| GSE36640 | Up | 0.0087137891 |
| GSE54402 | Down | -0.0299446978 |
| GSE9593 | Down | -0.0929170939 |
| GSE43922 | Up | 0.0740728512 |
| GSE24585 | Down | -0.0911829044 |
| GSE37065 | Down | -0.1051696803 |
| GSE28863_A1 | Down | -0.0865794473 |
| GSE28863_A2 | Down | -0.1750495074 |
| GSE28863_A3 | Up | 0.3044333128 |
| GSE28863_A4 | Up | 0.0475198744 |
| GSE48662 | Up | 1.4456645389 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016699 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-146a-5p | MIMAT0000449 | MIRT021228 | Microarray | Functional MTI (Weak) | 18057241 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
