HCSGD entry for XRCC6BP1
1. General information
| Official gene symbol | XRCC6BP1 |
|---|---|
| Entrez ID | 91419 |
| Gene full name | XRCC6 binding protein 1 |
| Other gene symbols | KUB3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004222 | Metalloendopeptidase activity | IEA | molecular_function |
| GO:0004677 | DNA-dependent protein kinase activity | TAS | molecular_function |
| GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex | NAS | cellular_component |
| GO:0006303 | Double-strand break repair via nonhomologous end joining | TAS | biological_process |
| GO:0006468 | Protein phosphorylation | TAS | biological_process |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0016310 | Phosphorylation | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8949216329 | 0.1146063979 | 0.9999902473 | 0.6486035254 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0000072186 |
| GSE13712_SHEAR | Down | -0.4802994392 |
| GSE13712_STATIC | Down | -0.1243862610 |
| GSE19018 | Up | 0.1270772049 |
| GSE19899_A1 | Down | -0.2190118313 |
| GSE19899_A2 | Down | -1.0367864955 |
| PubMed_21979375_A1 | Up | 0.1418748209 |
| PubMed_21979375_A2 | Down | -0.6336701848 |
| GSE35957 | Down | -0.4014857409 |
| GSE36640 | Down | -0.7279631182 |
| GSE54402 | Down | -0.2015341492 |
| GSE9593 | Down | -0.2081492633 |
| GSE43922 | Up | 0.0418825236 |
| GSE24585 | Up | 0.1672943025 |
| GSE37065 | Up | 0.1480130054 |
| GSE28863_A1 | Up | 0.2811079260 |
| GSE28863_A2 | Up | 0.2659756653 |
| GSE28863_A3 | Down | -0.0776338519 |
| GSE28863_A4 | Up | 0.0524640598 |
| GSE48662 | Down | -0.1756537633 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
