HCSGD entry for PDCD5
1. General information
| Official gene symbol | PDCD5 |
|---|---|
| Entrez ID | 9141 |
| Gene full name | programmed cell death 5 |
| Other gene symbols | TFAR19 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0043065 | Positive regulation of apoptotic process | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0992997796 | 0.6669104023 | 0.6579522516 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3043788250 |
| GSE13712_SHEAR | Up | 0.3609662806 |
| GSE13712_STATIC | Up | 0.1487378203 |
| GSE19018 | Down | -0.3276308779 |
| GSE19899_A1 | Up | 0.2940639172 |
| GSE19899_A2 | Up | 0.3843565702 |
| PubMed_21979375_A1 | Up | 0.3416530004 |
| PubMed_21979375_A2 | Up | 0.4922811166 |
| GSE35957 | Down | -0.4385858245 |
| GSE36640 | Down | -0.2208604420 |
| GSE54402 | Up | 0.4318601493 |
| GSE9593 | Down | -0.2227201781 |
| GSE43922 | Up | 0.2873640717 |
| GSE24585 | Down | -0.4994899636 |
| GSE37065 | Up | 0.0854252858 |
| GSE28863_A1 | Up | 0.1470754899 |
| GSE28863_A2 | Up | 0.0520307805 |
| GSE28863_A3 | Up | 0.1078772148 |
| GSE28863_A4 | Up | 0.1642465705 |
| GSE48662 | Down | -0.4011833858 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT039944 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT044914 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
