HCSGD entry for SLC39A13
1. General information
| Official gene symbol | SLC39A13 |
|---|---|
| Entrez ID | 91252 |
| Gene full name | solute carrier family 39 (zinc transporter), member 13 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005385 | Zinc ion transmembrane transporter activity | IC IDA | molecular_function |
| GO:0005794 | Golgi apparatus | IDA IEA ISS | cellular_component |
| GO:0006882 | Cellular zinc ion homeostasis | IDA IEA ISS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IDA | cellular_component |
| GO:0030173 | Integral component of Golgi membrane | IC | cellular_component |
| GO:0042803 | Protein homodimerization activity | IPI | molecular_function |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0048471 | Perinuclear region of cytoplasm | IEA ISS | cellular_component |
| GO:0061448 | Connective tissue development | IEA IMP | biological_process |
| GO:0071577 | Zinc ion transmembrane transport | IDA IEA ISS | biological_process |
| GO:0072511 | Divalent inorganic cation transport | IC IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0787498727 | 0.8817592379 | 0.5909999715 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2068814827 |
| GSE13712_SHEAR | Up | 0.3859605063 |
| GSE13712_STATIC | Up | 0.0871619671 |
| GSE19018 | Up | 0.0159651452 |
| GSE19899_A1 | Down | -0.2071150488 |
| GSE19899_A2 | Up | 0.8941763531 |
| PubMed_21979375_A1 | Up | 0.8577741924 |
| PubMed_21979375_A2 | Up | 0.4506566521 |
| GSE35957 | Up | 0.1868068978 |
| GSE36640 | Up | 0.8695629639 |
| GSE54402 | Down | -0.0941232245 |
| GSE9593 | Up | 0.4523995104 |
| GSE43922 | Down | -0.0355781021 |
| GSE24585 | Up | 0.2184462509 |
| GSE37065 | Down | -0.0916255188 |
| GSE28863_A1 | Down | -0.0998894885 |
| GSE28863_A2 | Up | 0.1120963017 |
| GSE28863_A3 | Down | -0.1695403067 |
| GSE28863_A4 | Down | -0.0029631528 |
| GSE48662 | Down | -0.0832105003 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042304 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
