HCSGD entry for MTMR6
1. General information
| Official gene symbol | MTMR6 |
|---|---|
| Entrez ID | 9107 |
| Gene full name | myotubularin related protein 6 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004722 | Protein serine/threonine phosphatase activity | NAS | molecular_function |
| GO:0004725 | Protein tyrosine phosphatase activity | NAS | molecular_function |
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006470 | Protein dephosphorylation | NAS | biological_process |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006661 | Phosphatidylinositol biosynthetic process | TAS | biological_process |
| GO:0006810 | Transport | IDA | biological_process |
| GO:0006812 | Cation transport | IDA | biological_process |
| GO:0015269 | Calcium-activated potassium channel activity | IDA | molecular_function |
| GO:0015672 | Monovalent inorganic cation transport | IDA | biological_process |
| GO:0030001 | Metal ion transport | IDA | biological_process |
| GO:0034220 | Ion transmembrane transport | IDA | biological_process |
| GO:0035335 | Peptidyl-tyrosine dephosphorylation | NAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | IDA | biological_process |
| GO:0071805 | Potassium ion transmembrane transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9626701569 | 0.0643914859 | 0.9999902473 | 0.4785003670 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1381689879 |
| GSE13712_SHEAR | Up | 0.0956129339 |
| GSE13712_STATIC | Up | 0.0652730423 |
| GSE19018 | Down | -0.2554646670 |
| GSE19899_A1 | Down | -0.0389557790 |
| GSE19899_A2 | Down | -0.3695452483 |
| PubMed_21979375_A1 | Up | 0.2014080285 |
| PubMed_21979375_A2 | Down | -0.2091320213 |
| GSE35957 | Down | -0.0357221183 |
| GSE36640 | Down | -0.3133026473 |
| GSE54402 | Down | -0.1286939212 |
| GSE9593 | Down | -0.2186990369 |
| GSE43922 | Down | -0.0113533377 |
| GSE24585 | Down | -0.0198054678 |
| GSE37065 | Up | 0.0656369421 |
| GSE28863_A1 | Down | -0.2638472459 |
| GSE28863_A2 | Down | -0.0538709896 |
| GSE28863_A3 | Down | -0.7617806724 |
| GSE28863_A4 | Up | 0.2186167733 |
| GSE48662 | Down | -0.4459610784 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002587 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002587 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046382 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
