HCSGD entry for YIF1B
1. General information
| Official gene symbol | YIF1B |
|---|---|
| Entrez ID | 90522 |
| Gene full name | Yip1 interacting factor homolog B (S. cerevisiae) |
| Other gene symbols | FinGER8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9403659739 | 0.0933727024 | 0.9999902473 | 0.5819895148 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1782604774 |
| GSE13712_SHEAR | Down | -0.3815122301 |
| GSE13712_STATIC | Down | -0.2430797564 |
| GSE19018 | Up | 0.2032588659 |
| GSE19899_A1 | Down | -0.5359307155 |
| GSE19899_A2 | Down | -0.0194724797 |
| PubMed_21979375_A1 | Up | 0.3400886425 |
| PubMed_21979375_A2 | Up | 0.0315570714 |
| GSE35957 | Down | -0.5418625288 |
| GSE36640 | Down | -0.0642764384 |
| GSE54402 | Down | -0.1552255791 |
| GSE9593 | Up | 0.0334291503 |
| GSE43922 | Up | 0.0389631801 |
| GSE24585 | Down | -0.0634895970 |
| GSE37065 | Down | -0.2323209396 |
| GSE28863_A1 | Down | -0.4772111504 |
| GSE28863_A2 | Down | -0.2302438066 |
| GSE28863_A3 | Up | 0.0737044174 |
| GSE28863_A4 | Up | 0.1266332258 |
| GSE48662 | Up | 0.1441844554 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001396 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT001396 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027066 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049802 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
