HCSGD entry for IFT20
1. General information
| Official gene symbol | IFT20 |
|---|---|
| Entrez ID | 90410 |
| Gene full name | intraflagellar transport 20 homolog (Chlamydomonas) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005814 | Centriole | IEA | cellular_component |
| GO:0005929 | Cilium | IEA | cellular_component |
| GO:0030992 | Intraciliary transport particle B | IEA | cellular_component |
| GO:0034067 | Protein localization to Golgi apparatus | IMP | biological_process |
| GO:0042384 | Cilium assembly | IMP | biological_process |
| GO:0044292 | Dendrite terminus | IEA | cellular_component |
| GO:0051642 | Centrosome localization | IEA | biological_process |
| GO:1902017 | Regulation of cilium assembly | ISS | biological_process |
| GO:2000785 | Regulation of autophagic vacuole assembly | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0216255006 | 0.9650432620 | 0.3542033603 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.8738184411 |
| GSE13712_SHEAR | Down | -0.0646072035 |
| GSE13712_STATIC | Up | 0.0694396625 |
| GSE19018 | Up | 0.5168275138 |
| GSE19899_A1 | Up | 0.4401378542 |
| GSE19899_A2 | Up | 0.6594627940 |
| PubMed_21979375_A1 | Up | 0.5994033721 |
| PubMed_21979375_A2 | Up | 0.8734621263 |
| GSE35957 | Down | -0.1837225111 |
| GSE36640 | Up | 0.8943871579 |
| GSE54402 | Up | 0.0677495158 |
| GSE9593 | Up | 0.3256482808 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1026925977 |
| GSE28863_A2 | Down | -0.0761342767 |
| GSE28863_A3 | Down | -0.4008050344 |
| GSE28863_A4 | Up | 0.2127385395 |
| GSE48662 | Down | -0.1841850288 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
