HCSGD entry for CTU1

1. General information

Official gene symbolCTU1
Entrez ID90353
Gene full namecytosolic thiouridylase subunit 1
Other gene symbolsATPBD3 NCS6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000049TRNA bindingIEAmolecular_function
GO:0002098TRNA wobble uridine modificationNASbiological_process
GO:0005515Protein bindingIPImolecular_function
GO:0005524ATP bindingIEAmolecular_function
GO:0005739MitochondrionIEAcellular_component
GO:0005829CytosolISScellular_component
GO:0016779Nucleotidyltransferase activityIEAmolecular_function
GO:0032447Protein urmylationIEAbiological_process
GO:0034227TRNA thio-modificationNASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.49162092630.68821430040.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922Up0.3752087902
GSE24585Up0.0774975200
GSE37065Down-0.1917690284
GSE28863_A1Down-0.4524672664
GSE28863_A2Down-0.3907688210
GSE28863_A3Up0.5074027520
GSE28863_A4Up0.0157974653
GSE48662Up0.3622918561

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.