HCSGD entry for BAZ1B
1. General information
| Official gene symbol | BAZ1B |
|---|---|
| Entrez ID | 9031 |
| Gene full name | bromodomain adjacent to zinc finger domain, 1B |
| Other gene symbols | WBSCR10 WBSCR9 WSTF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000793 | Condensed chromosome | IEA | cellular_component |
| GO:0003007 | Heart morphogenesis | ISS | biological_process |
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0004713 | Protein tyrosine kinase activity | IDA | molecular_function |
| GO:0004715 | Non-membrane spanning protein tyrosine kinase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005721 | Centromeric heterochromatin | IEA | cellular_component |
| GO:0006302 | Double-strand break repair | ISS | biological_process |
| GO:0006337 | Nucleosome disassembly | IDA | biological_process |
| GO:0006351 | Transcription, DNA-templated | NAS | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | ISS | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0008270 | Zinc ion binding | NAS | molecular_function |
| GO:0010469 | Regulation of receptor activity | IMP | biological_process |
| GO:0016572 | Histone phosphorylation | IDA | biological_process |
| GO:0018108 | Peptidyl-tyrosine phosphorylation | IDA | biological_process |
| GO:0032947 | Protein complex scaffold | IDA | molecular_function |
| GO:0034725 | DNA replication-dependent nucleosome disassembly | IMP | biological_process |
| GO:0035173 | Histone kinase activity | IDA | molecular_function |
| GO:0042809 | Vitamin D receptor binding | IPI | molecular_function |
| GO:0043044 | ATP-dependent chromatin remodeling | IDA | biological_process |
| GO:0043596 | Nuclear replication fork | IDA | cellular_component |
| GO:0048096 | Chromatin-mediated maintenance of transcription | ISS | biological_process |
| GO:0070577 | Histone acetyl-lysine binding | IDA | molecular_function |
| GO:0071778 | WINAC complex | IDA | cellular_component |
| GO:0071884 | Vitamin D receptor activator activity | IMP | molecular_function |
| GO:2000273 | Positive regulation of receptor activity | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0738899130 | 0.6097732647 | 0.5774607185 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1654058811 |
| GSE13712_SHEAR | Up | 0.0011178166 |
| GSE13712_STATIC | Down | -0.0094645700 |
| GSE19018 | Down | -0.3745032675 |
| GSE19899_A1 | Down | -0.1195686454 |
| GSE19899_A2 | Down | -0.2642603504 |
| PubMed_21979375_A1 | Down | -0.2655268820 |
| PubMed_21979375_A2 | Up | 0.0456518795 |
| GSE35957 | Down | -0.2064976246 |
| GSE36640 | Down | -0.8299583726 |
| GSE54402 | Up | 0.1616092020 |
| GSE9593 | Up | 0.0605284043 |
| GSE43922 | Down | -0.0284052953 |
| GSE24585 | Up | 0.1791957366 |
| GSE37065 | Down | -0.0479741850 |
| GSE28863_A1 | Up | 1.1109277125 |
| GSE28863_A2 | Up | 1.3251308809 |
| GSE28863_A3 | Up | 0.6864426607 |
| GSE28863_A4 | Down | -0.0084286767 |
| GSE48662 | Up | 0.4640454536 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028399 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030674 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032225 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032225 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-505-5p | MIMAT0004776 | MIRT037969 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041340 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042537 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30b-5p | MIMAT0000420 | MIRT046114 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048402 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051294 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051383 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051627 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051860 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052553 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
