HCSGD entry for TAF1A

1. General information

Official gene symbolTAF1A
Entrez ID9015
Gene full nameTATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
Other gene symbolsMGC:17061 RAFI48 SL1 TAFI48
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000120RNA polymerase I transcription factor complexIEAcellular_component
GO:0003677DNA bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006360Transcription from RNA polymerase I promoterIEA TASbiological_process
GO:0006361Transcription initiation from RNA polymerase I promoterTASbiological_process
GO:0006362Transcription elongation from RNA polymerase I promoterTASbiological_process
GO:0006363Termination of RNA polymerase I transcriptionTASbiological_process
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0010467Gene expressionTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.23050477950.03554603170.91400640250.3571019466

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2734260318
GSE13712_SHEARUp1.3384675221
GSE13712_STATICDown-0.0722038490
GSE19018Down-0.3387378366
GSE19899_A1Down-0.4088647484
GSE19899_A2Down-0.1493066358
PubMed_21979375_A1Down-0.0328003610
PubMed_21979375_A2Down-0.6008631640
GSE35957Down-1.4116887485
GSE36640Down-0.8564591079
GSE54402Up0.4812225272
GSE9593Down-0.1732551356
GSE43922Up0.2096898663
GSE24585Down-0.1005662595
GSE37065Up0.3338873834
GSE28863_A1Up0.2269315860
GSE28863_A2Up0.3030408215
GSE28863_A3Down-0.8721185936
GSE28863_A4Down-0.2242085986
GSE48662Down-0.1551902417

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022398MicroarrayFunctional MTI (Weak)18668037
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.