HCSGD entry for TAF1C

1. General information

Official gene symbolTAF1C
Entrez ID9013
Gene full nameTATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
Other gene symbolsMGC:39976 SL1 TAFI110 TAFI95
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006360Transcription from RNA polymerase I promoterTASbiological_process
GO:0006361Transcription initiation from RNA polymerase I promoterTASbiological_process
GO:0006362Transcription elongation from RNA polymerase I promoterTASbiological_process
GO:0006363Termination of RNA polymerase I transcriptionTASbiological_process
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0010467Gene expressionTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.84191349870.29113346000.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0062039511
GSE13712_SHEARDown-0.3083454027
GSE13712_STATICDown-0.4980947144
GSE19018Down-0.2602764100
GSE19899_A1Down-0.0238756556
GSE19899_A2Up0.0046164916
PubMed_21979375_A1Up0.4045118696
PubMed_21979375_A2Up0.1055958295
GSE35957Down-0.1451814069
GSE36640Down-0.1056462204
GSE54402Up0.0457383523
GSE9593Down-0.3528702204
GSE43922Up0.0515067256
GSE24585Down-0.1587709363
GSE37065Down-0.0586240502
GSE28863_A1Up0.2932135654
GSE28863_A2Up0.3382020034
GSE28863_A3Up0.0686865412
GSE28863_A4Down-0.0415819732
GSE48662Down-0.3682650563

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-30d-5pMIMAT0000245MIRT047782CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.