HCSGD entry for TSR2
1. General information
| Official gene symbol | TSR2 |
|---|---|
| Entrez ID | 90121 |
| Gene full name | TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) |
| Other gene symbols | DT1P1A10 WGG1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0006364 | RRNA processing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5396818738 | 0.0376915657 | 0.9999902473 | 0.3662703430 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6926653528 |
| GSE13712_SHEAR | Down | -0.1577962030 |
| GSE13712_STATIC | Down | -0.3580154847 |
| GSE19018 | Down | -0.2325405920 |
| GSE19899_A1 | Down | -0.4259122759 |
| GSE19899_A2 | Down | -0.7866032219 |
| PubMed_21979375_A1 | Down | -0.7585341584 |
| PubMed_21979375_A2 | Down | -1.2722361209 |
| GSE35957 | Up | 0.1594941153 |
| GSE36640 | Down | -0.2194490533 |
| GSE54402 | Down | -0.0055084936 |
| GSE9593 | Up | 0.6222628049 |
| GSE43922 | Down | -0.4738463860 |
| GSE24585 | Down | -0.3619424773 |
| GSE37065 | Down | -0.1348944220 |
| GSE28863_A1 | Down | -0.4308442257 |
| GSE28863_A2 | Up | 0.0595149355 |
| GSE28863_A3 | Up | 0.2795380237 |
| GSE28863_A4 | Up | 0.1580362850 |
| GSE48662 | Up | 0.4938200945 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022680 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036048 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
