HCSGD entry for FUBP3
1. General information
| Official gene symbol | FUBP3 |
|---|---|
| Entrez ID | 8939 |
| Gene full name | far upstream element (FUSE) binding protein 3 |
| Other gene symbols | FBP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA NAS | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IDA | biological_process |
| GO:0010628 | Positive regulation of gene expression | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1088052544 | 0.9274107405 | 0.6834853327 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0270028034 |
| GSE13712_SHEAR | Up | 0.4657408929 |
| GSE13712_STATIC | Up | 0.2232013883 |
| GSE19018 | Down | -0.0906416397 |
| GSE19899_A1 | Up | 0.3937688040 |
| GSE19899_A2 | Up | 0.2903661550 |
| PubMed_21979375_A1 | Up | 0.7503072316 |
| PubMed_21979375_A2 | Up | 0.2555695712 |
| GSE35957 | Up | 0.0353346743 |
| GSE36640 | Down | -0.1309422972 |
| GSE54402 | Up | 0.3488881682 |
| GSE9593 | Down | -0.0707222506 |
| GSE43922 | Up | 0.1792211391 |
| GSE24585 | Up | 0.0021316380 |
| GSE37065 | Down | -0.2847714311 |
| GSE28863_A1 | Up | 0.1113161801 |
| GSE28863_A2 | Down | -0.0623901771 |
| GSE28863_A3 | Up | 0.2699973583 |
| GSE28863_A4 | Up | 0.1016566240 |
| GSE48662 | Down | -0.1434849100 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020823 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1 | MIMAT0000416 | MIRT023861 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT045868 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
