HCSGD entry for CPNE3
1. General information
| Official gene symbol | CPNE3 |
|---|---|
| Entrez ID | 8895 |
| Gene full name | copine III |
| Other gene symbols | CPN3 PRO1071 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004674 | Protein serine/threonine kinase activity | IDA | molecular_function |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005544 | Calcium-dependent phospholipid binding | TAS | molecular_function |
| GO:0005737 | Cytoplasm | NAS | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0006468 | Protein phosphorylation | IDA | biological_process |
| GO:0006629 | Lipid metabolic process | TAS | biological_process |
| GO:0016192 | Vesicle-mediated transport | TAS | biological_process |
| GO:0016310 | Phosphorylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1946546218 | 0.1681583185 | 0.8547721555 | 0.7930220591 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3311144280 |
| GSE13712_SHEAR | Down | -0.4869059336 |
| GSE13712_STATIC | Down | -0.0403753121 |
| GSE19018 | Up | 1.0093993484 |
| GSE19899_A1 | Up | 0.0143685124 |
| GSE19899_A2 | Up | 0.2125870449 |
| PubMed_21979375_A1 | Down | -0.0937440060 |
| PubMed_21979375_A2 | Up | 0.0417639486 |
| GSE35957 | Up | 0.1239721697 |
| GSE36640 | Up | 0.2301277233 |
| GSE54402 | Up | 0.1917095594 |
| GSE9593 | Up | 0.3887272010 |
| GSE43922 | Up | 0.0040253720 |
| GSE24585 | Down | -0.7484178927 |
| GSE37065 | Up | 0.0732735246 |
| GSE28863_A1 | Down | -0.0627131579 |
| GSE28863_A2 | Up | 0.3920011801 |
| GSE28863_A3 | Down | -0.7401625441 |
| GSE28863_A4 | Down | -0.3260101607 |
| GSE48662 | Down | -0.4892357965 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002575 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-133b | MIMAT0000770 | MIRT007128 | Luciferase reporter assay | Functional MTI | 23451058 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
