HCSGD entry for FUBP1
1. General information
| Official gene symbol | FUBP1 |
|---|---|
| Entrez ID | 8880 |
| Gene full name | far upstream element (FUSE) binding protein 1 |
| Other gene symbols | FBP FUBP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003697 | Single-stranded DNA binding | TAS | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0010628 | Positive regulation of gene expression | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9871791421 | 0.0053081912 | 0.9999902473 | 0.1480930453 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4261956205 |
| GSE13712_SHEAR | Up | 0.1302686311 |
| GSE13712_STATIC | Down | -0.2196223344 |
| GSE19018 | Down | -0.3937761383 |
| GSE19899_A1 | Down | -0.3255313700 |
| GSE19899_A2 | Down | -1.3241977696 |
| PubMed_21979375_A1 | Down | -0.5204548466 |
| PubMed_21979375_A2 | Down | -0.7682369261 |
| GSE35957 | Down | -0.2769931225 |
| GSE36640 | Down | -0.7295844339 |
| GSE54402 | Down | -0.5563160281 |
| GSE9593 | Down | -0.8255428552 |
| GSE43922 | Down | -0.5296576463 |
| GSE24585 | Down | -0.1882122090 |
| GSE37065 | Up | 0.0566097257 |
| GSE28863_A1 | Up | 0.2724575429 |
| GSE28863_A2 | Up | 0.4793380259 |
| GSE28863_A3 | Down | -0.5035392856 |
| GSE28863_A4 | Down | -0.2104492218 |
| GSE48662 | Down | -0.1508727787 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| MGI-114 | DB05786 | - |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020591 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1 | MIMAT0000416 | MIRT023618 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024616 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026246 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030728 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039813 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042947 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046588 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-22-3p | MIMAT0000077 | MIRT050458 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
