HCSGD entry for VNN2
1. General information
| Official gene symbol | VNN2 |
|---|---|
| Entrez ID | 8875 |
| Gene full name | vanin 2 |
| Other gene symbols | FOAP-4 GPI-80 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006807 | Nitrogen compound metabolic process | IEA | biological_process |
| GO:0006928 | Cellular component movement | TAS | biological_process |
| GO:0015939 | Pantothenate metabolic process | IDA | biological_process |
| GO:0016811 | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEA | molecular_function |
| GO:0017159 | Pantetheine hydrolase activity | IDA | molecular_function |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2049390905 | 0.9265034269 | 0.8727824300 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1173459756 |
| GSE13712_SHEAR | Down | -0.0137730851 |
| GSE13712_STATIC | Up | 0.0276205107 |
| GSE19018 | Down | -0.0485971433 |
| GSE19899_A1 | Up | 0.1593268970 |
| GSE19899_A2 | Up | 0.3615223662 |
| PubMed_21979375_A1 | Up | 0.4169939057 |
| PubMed_21979375_A2 | Up | 0.1073927788 |
| GSE35957 | Up | 0.1679455594 |
| GSE36640 | Up | 1.3683785769 |
| GSE54402 | Down | -0.4761128060 |
| GSE9593 | Up | 0.1201134001 |
| GSE43922 | Up | 0.0133152163 |
| GSE24585 | Up | 0.1154584089 |
| GSE37065 | Down | -0.0191552868 |
| GSE28863_A1 | Down | -0.0715202993 |
| GSE28863_A2 | Up | 0.0329820017 |
| GSE28863_A3 | Up | 0.0864017254 |
| GSE28863_A4 | Down | -0.0336153176 |
| GSE48662 | Up | 0.2620703159 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016760 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022124 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028816 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
