HCSGD entry for PEX11B
1. General information
| Official gene symbol | PEX11B |
|---|---|
| Entrez ID | 8799 |
| Gene full name | peroxisomal biogenesis factor 11 beta |
| Other gene symbols | PEX11-BETA PEX14B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005778 | Peroxisomal membrane | IDA | cellular_component |
| GO:0005779 | Integral component of peroxisomal membrane | IDA IEA ISS | cellular_component |
| GO:0007031 | Peroxisome organization | IDA ISS | biological_process |
| GO:0007165 | Signal transduction | ISS | biological_process |
| GO:0016559 | Peroxisome fission | IDA IEA | biological_process |
| GO:0042803 | Protein homodimerization activity | IDA | molecular_function |
| GO:0043234 | Protein complex | IDA | cellular_component |
| GO:0044375 | Regulation of peroxisome size | IDA | biological_process |
| GO:0051260 | Protein homooligomerization | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6001300558 | 0.1033038828 | 0.9999902473 | 0.6158689694 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4815474187 |
| GSE13712_SHEAR | Down | -0.4466260603 |
| GSE13712_STATIC | Down | -0.1775389120 |
| GSE19018 | Down | -0.0053067115 |
| GSE19899_A1 | Down | -0.1735923283 |
| GSE19899_A2 | Down | -0.1241374876 |
| PubMed_21979375_A1 | Down | -1.4043056875 |
| PubMed_21979375_A2 | Up | 0.0475908519 |
| GSE35957 | Up | 0.1873436786 |
| GSE36640 | Up | 0.8741033500 |
| GSE54402 | Down | -0.3270362766 |
| GSE9593 | Up | 0.2859481588 |
| GSE43922 | Down | -0.1740892521 |
| GSE24585 | Up | 0.4872177981 |
| GSE37065 | Up | 0.0200319936 |
| GSE28863_A1 | Down | -0.1840451562 |
| GSE28863_A2 | Down | -0.0147227738 |
| GSE28863_A3 | Down | -0.8002917544 |
| GSE28863_A4 | Down | -0.1826192998 |
| GSE48662 | Up | 0.0810711456 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005144 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016374 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-375 | MIMAT0000728 | MIRT019825 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032298 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
